Table 1.- Variants (SNPs) included in the PRS calculation
(Disease/Trait: Asthma_and_hay_fever)
rsID Risk allele Effect size
rs4833095 T 0.182
rs1438673 C 0.148
rs10197862 A 0.215
rs7212938 G 0.148
rs17294280 G 0.166
rs62026376 C 0.157
Effect size: LN(OR)
Table 2.- PRS Score distribution among populations and regions
(Disease/Trait: Asthma_and_hay_fever)
count mean sd se lower.ci upper.ci
Pyrenean regions
WEST 168 0.101 0.021 0.002 0.098 0.104
SOUTH 83 0.097 0.023 0.003 0.092 0.102
EAST 146 0.102 0.022 0.002 0.098 0.106
Populations
IBS 107 0.101 0.022 0.002 0.097 0.105
PIR 397 0.101 0.022 0.001 0.098 0.103
Table 3.- Pairwise t-test for PRS score among populations and regions
(Disease/Trait: Asthma_and_hay_fever)
group1 group2 n1 n2 p p.signif p.adj p.adj.signif
IBS PIR 107 397 0.781 ns 1 ns
IBS WEST 107 168 0.904 ns 1 ns
IBS SOUTH 107 83 0.236 ns 1 ns
IBS EAST 107 146 0.792 ns 1 ns
WEST SOUTH 168 83 0.238 ns 1 ns
WEST EAST 168 146 0.668 ns 1 ns
SOUTH EAST 83 146 0.132 ns 1 ns
* p < .05, ** p < .01, *** p < .001
Table 4.- Chi-square test comparison of percentile counts on Pyrenean regions compared to Iberian peninsula population
(Disease/Trait: Asthma_and_hay_fever)
Percentile rank PIR WEST SOUTH EAST
adj.std.val p.value sig.val adj.std.val p.value sig.val adj.std.val p.value sig.val adj.std.val p.value sig.val
pct95 −1.550 0.121 . white −1.180 0.238 . white −1.550 0.121 . white −0.410 0.682 . white
pct75.95 0.480 0.631 . white 0.270 0.787 . white 0.480 0.631 . white −0.570 0.569 . white
pct50.75 −0.270 0.787 . white −0.260 0.795 . white −0.270 0.787 . white 0.960 0.337 . white
pct25.50 0.120 0.904 . white 1.260 0.208 . white 0.120 0.904 . white 0.730 0.465 . white
pct25 0.490 0.624 . white −0.670 0.503 . white 0.490 0.624 . white −0.990 0.322 . white
adj.std.val: Adjusted standardized residuals value; p.value: P value; sig.val: statistical significance, * p < .05, ** p < .01, *** p < .001; red dash to bottom: lower counts than reference; green dash to up: upper counts than reference