Table 1.- Variants (SNPs) included in the PRS calculation
(Disease/Trait: Diarrhoeal_Disease)
rsID Risk allele Effect size
rs12462111 C 0.207
Effect size: LN(OR)
Table 2.- PRS Score distribution among populations and regions
(Disease/Trait: Diarrhoeal_Disease)
count mean sd se lower.ci upper.ci
Pyrenean regions
WEST 168 0.118 0.075 0.006 0.107 0.130
SOUTH 83 0.099 0.062 0.007 0.085 0.112
EAST 146 0.115 0.073 0.006 0.103 0.127
Populations
IBS 107 0.120 0.074 0.007 0.106 0.134
PIR 397 0.113 0.072 0.004 0.106 0.120
Table 3.- Pairwise t-test for PRS score among populations and regions
(Disease/Trait: Diarrhoeal_Disease)
group1 group2 n1 n2 p p.signif p.adj p.adj.signif
IBS PIR 107 397 0.3710 ns 1.000 ns
IBS WEST 107 168 0.8530 ns 1.000 ns
IBS SOUTH 107 83 0.0431 * 0.431 ns
IBS EAST 107 146 0.5800 ns 1.000 ns
WEST SOUTH 168 83 0.0419 * 0.419 ns
WEST EAST 168 146 0.6740 ns 1.000 ns
SOUTH EAST 83 146 0.1010 ns 1.000 ns
* p < .05, ** p < .01, *** p < .001
Table 4.- Chi-square test comparison of percentile counts on Pyrenean regions compared to Iberian peninsula population
(Disease/Trait: Diarrhoeal_Disease)
Percentile rank PIR WEST SOUTH EAST
adj.std.val p.value sig.val adj.std.val p.value sig.val adj.std.val p.value sig.val adj.std.val p.value sig.val
pct95 0.000 1.000 . white 0.000 1.000 . white 0.000 1.000 . white 0.000 1.000 . white
pct75.95 0.000 1.000 . white 0.000 1.000 . white 0.000 1.000 . white 0.000 1.000 . white
pct50.75 −2.940 0.003 ** −0.010 0.992 . white −2.940 0.003 ** −0.630 0.529 . white
pct25.50 0.000 1.000 . white 0.000 1.000 . white 0.000 1.000 . white 0.000 1.000 . white
pct25 2.940 0.003 ** 0.010 0.992 . white 2.940 0.003 ** 0.630 0.529 . white
adj.std.val: Adjusted standardized residuals value; p.value: P value; sig.val: statistical significance, * p < .05, ** p < .01, *** p < .001; red dash to bottom: lower counts than reference; green dash to up: upper counts than reference