Table 1.- Variants (SNPs) included in the PRS calculation
(Disease/Trait: Longevity)
rsID Risk allele Effect size
rs2784505 G 0.14
Effect size: LN(OR)
Table 2.- PRS Score distribution among populations and regions
(Disease/Trait: Longevity)
count mean sd se lower.ci upper.ci
Pyrenean regions
WEST 168 0.011 0.025 0.002 0.007 0.015
SOUTH 83 0.004 0.017 0.002 0.001 0.008
EAST 146 0.010 0.025 0.002 0.006 0.014
Populations
IBS 107 0.010 0.024 0.002 0.005 0.014
PIR 397 0.009 0.024 0.001 0.007 0.012
Table 3.- Pairwise t-test for PRS score among populations and regions
(Disease/Trait: Longevity)
group1 group2 n1 n2 p p.signif p.adj p.adj.signif
IBS PIR 107 397 0.8030 ns 1.000 ns
IBS WEST 107 168 0.7280 ns 1.000 ns
IBS SOUTH 107 83 0.1070 ns 1.000 ns
IBS EAST 107 146 0.9330 ns 1.000 ns
WEST SOUTH 168 83 0.0378 * 0.378 ns
WEST EAST 168 146 0.7760 ns 1.000 ns
SOUTH EAST 83 146 0.0729 ns 0.729 ns
* p < .05, ** p < .01, *** p < .001
Table 4.- Chi-square test comparison of percentile counts on Pyrenean regions compared to Iberian peninsula population
(Disease/Trait: Longevity)
Percentile rank PIR WEST SOUTH EAST
adj.std.val p.value sig.val adj.std.val p.value sig.val adj.std.val p.value sig.val adj.std.val p.value sig.val
pct95 0.000 1.000 . white 0.000 1.000 . white 0.000 1.000 . white 0.000 1.000 . white
pct75.95 −1.780 0.075 . white 0.330 0.741 . white −1.780 0.075 . white 0.080 0.936 . white
pct50.75 0.000 1.000 . white 0.000 1.000 . white 0.000 1.000 . white 0.000 1.000 . white
pct25.50 0.000 1.000 . white 0.000 1.000 . white 0.000 1.000 . white 0.000 1.000 . white
pct25 1.780 0.075 . white −0.330 0.741 . white 1.780 0.075 . white −0.080 0.936 . white
adj.std.val: Adjusted standardized residuals value; p.value: P value; sig.val: statistical significance, * p < .05, ** p < .01, *** p < .001; red dash to bottom: lower counts than reference; green dash to up: upper counts than reference