Table 1.- Variants (SNPs) included in the PRS calculation
(Disease/Trait: Male-pattern_baldness)
rsID Risk allele Effect size
rs2497938 T 0.788
rs6047844 T 0.470
rs9287638 A 0.270
rs2073963 G 0.255
rs12565727 A 0.285
rs12373124 T 0.285
rs6945541 C 0.239
rs10502861 C 0.247
Effect size: LN(OR)
Table 2.- PRS Score distribution among populations and regions
(Disease/Trait: Male-pattern_baldness)
count mean sd se lower.ci upper.ci
Pyrenean regions
WEST 65 0.188 0.040 0.005 0.178 0.198
SOUTH 38 0.209 0.040 0.006 0.196 0.222
EAST 89 0.195 0.045 0.005 0.185 0.204
Populations
IBS 54 0.186 0.037 0.005 0.176 0.196
PIR 192 0.195 0.043 0.003 0.189 0.201
Table 3.- Pairwise t-test for PRS score among populations and regions
(Disease/Trait: Male-pattern_baldness)
group1 group2 n1 n2 p p.signif p.adj p.adj.signif
IBS PIR 54 192 0.1410 ns 1.000 ns
IBS WEST 54 65 0.7440 ns 1.000 ns
IBS SOUTH 54 38 0.0103 * 0.103 ns
IBS EAST 54 89 0.2180 ns 1.000 ns
WEST SOUTH 65 38 0.0179 * 0.179 ns
WEST EAST 65 89 0.3490 ns 1.000 ns
SOUTH EAST 38 89 0.0870 ns 0.870 ns
* p < .05, ** p < .01, *** p < .001
Table 4.- Chi-square test comparison of percentile counts on Pyrenean regions compared to Iberian peninsula population
(Disease/Trait: Male-pattern_baldness)
Percentile rank PIR WEST SOUTH EAST
adj.std.val p.value sig.val adj.std.val p.value sig.val adj.std.val p.value sig.val adj.std.val p.value sig.val
pct95 2.100 0.036 * 1.850 0.064 . white 2.100 0.036 * 1.950 0.051 .
pct75.95 1.650 0.099 . white 0.310 0.757 . white 1.650 0.099 . white 0.970 0.332 . white
pct50.75 −0.180 0.857 . white −2.300 0.021 * −0.180 0.857 . white −1.590 0.112 . white
pct25.50 −1.830 0.067 . white 0.580 0.562 . white −1.830 0.067 . white 0.280 0.779 . white
pct25 −0.540 0.589 . white 0.580 0.562 . white −0.540 0.589 . white −0.470 0.638 . white
adj.std.val: Adjusted standardized residuals value; p.value: P value; sig.val: statistical significance, * p < .05, ** p < .01, *** p < .001; red dash to bottom: lower counts than reference; green dash to up: upper counts than reference