Table 1.- Variants (SNPs) included in the PRS calculation
(Disease/Trait: Sasang_constitutional_medicine)
rsID Risk allele Effect size
rs7193144 TRUE 0.315
Effect size: LN(OR)
Table 2.- PRS Score distribution among populations and regions
(Disease/Trait: Sasang_constitutional_medicine)
count mean sd se lower.ci upper.ci
Pyrenean regions
WEST 168 0.198 0.114 0.009 0.180 0.215
SOUTH 83 0.182 0.106 0.012 0.159 0.205
EAST 146 0.186 0.110 0.009 0.167 0.204
Populations
IBS 107 0.197 0.119 0.011 0.174 0.220
PIR 397 0.190 0.111 0.006 0.179 0.201
Table 3.- Pairwise t-test for PRS score among populations and regions
(Disease/Trait: Sasang_constitutional_medicine)
group1 group2 n1 n2 p p.signif p.adj p.adj.signif
IBS PIR 107 397 0.555 ns 1 ns
IBS WEST 107 168 0.967 ns 1 ns
IBS SOUTH 107 83 0.358 ns 1 ns
IBS EAST 107 146 0.412 ns 1 ns
WEST SOUTH 168 83 0.298 ns 1 ns
WEST EAST 168 146 0.334 ns 1 ns
SOUTH EAST 83 146 0.826 ns 1 ns
* p < .05, ** p < .01, *** p < .001
Table 4.- Chi-square test comparison of percentile counts on Pyrenean regions compared to Iberian peninsula population
(Disease/Trait: Sasang_constitutional_medicine)
Percentile rank PIR WEST SOUTH EAST
adj.std.val p.value sig.val adj.std.val p.value sig.val adj.std.val p.value sig.val adj.std.val p.value sig.val
pct95 0.000 1.000 . white 0.000 1.000 . white 0.000 1.000 . white 0.000 1.000 . white
pct75.95 0.000 1.000 . white 0.000 1.000 . white 0.000 1.000 . white 0.000 1.000 . white
pct50.75 −1.770 0.077 . white −0.270 0.787 . white −1.770 0.077 . white −1.450 0.147 . white
pct25.50 0.000 1.000 . white 0.000 1.000 . white 0.000 1.000 . white 0.000 1.000 . white
pct25 1.770 0.077 . white 0.270 0.787 . white 1.770 0.077 . white 1.450 0.147 . white
adj.std.val: Adjusted standardized residuals value; p.value: P value; sig.val: statistical significance, * p < .05, ** p < .01, *** p < .001; red dash to bottom: lower counts than reference; green dash to up: upper counts than reference